HCSGD entry for ISM2
1. General information
| Official gene symbol | ISM2 |
|---|---|
| Entrez ID | 145501 |
| Gene full name | isthmin 2 |
| Other gene symbols | TAIL1 THSD3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6848183238 | 0.5159737586 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3477773628 |
| GSE13712_SHEAR | Down | -0.1126202560 |
| GSE13712_STATIC | Down | -0.1878406702 |
| GSE19018 | Up | 0.2919762978 |
| GSE19899_A1 | Down | -0.0893961245 |
| GSE19899_A2 | Up | 0.3553083186 |
| PubMed_21979375_A1 | Down | -0.0841342369 |
| PubMed_21979375_A2 | Up | 0.1320402929 |
| GSE35957 | Up | 0.1025460694 |
| GSE36640 | Up | 0.0603816836 |
| GSE54402 | Down | -0.1371326225 |
| GSE9593 | Down | -0.1505536895 |
| GSE43922 | Down | -0.0132937576 |
| GSE24585 | Down | -0.0265010867 |
| GSE37065 | Up | 0.0123110349 |
| GSE28863_A1 | Up | 0.0086229902 |
| GSE28863_A2 | Down | -0.0489017541 |
| GSE28863_A3 | Up | 0.3115914209 |
| GSE28863_A4 | Up | 0.1310899171 |
| GSE48662 | Down | -0.1204569779 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042370 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049167 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
