HCSGD entry for SYT9
1. General information
| Official gene symbol | SYT9 |
|---|---|
| Entrez ID | 143425 |
| Gene full name | synaptotagmin IX |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | IEA | molecular_function |
| GO:0008021 | Synaptic vesicle | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030667 | Secretory granule membrane | IEA | cellular_component |
| GO:0030672 | Synaptic vesicle membrane | IEA | cellular_component |
| GO:0031045 | Dense core granule | IEA | cellular_component |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0045956 | Positive regulation of calcium ion-dependent exocytosis | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0050796 | Regulation of insulin secretion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7724153794 | 0.8812458417 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0399268517 |
| GSE13712_SHEAR | Up | 0.0927642795 |
| GSE13712_STATIC | Up | 0.0422297872 |
| GSE19018 | Up | 0.1594266337 |
| GSE19899_A1 | Up | 0.0457338814 |
| GSE19899_A2 | Up | 0.0739167477 |
| PubMed_21979375_A1 | Up | 0.0585899230 |
| PubMed_21979375_A2 | Up | 0.0331080712 |
| GSE35957 | Down | -0.0365176513 |
| GSE36640 | Up | 0.0278645527 |
| GSE54402 | Up | 0.0092844617 |
| GSE9593 | Down | -0.0181047833 |
| GSE43922 | Up | 0.0455982177 |
| GSE24585 | Down | -0.2879603910 |
| GSE37065 | Down | -0.0019250705 |
| GSE28863_A1 | Up | 0.0700865366 |
| GSE28863_A2 | Up | 0.0248841942 |
| GSE28863_A3 | Up | 0.1081147924 |
| GSE28863_A4 | Up | 0.0485026800 |
| GSE48662 | Up | 0.0158339586 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026062 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
