HCSGD entry for PABPC5
1. General information
| Official gene symbol | PABPC5 |
|---|---|
| Entrez ID | 140886 |
| Gene full name | poly(A) binding protein, cytoplasmic 5 |
| Other gene symbols | PABP5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005759 | Mitochondrial matrix | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9608226435 | 0.0205804111 | 0.9999902473 | 0.2773666155 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1756311338 |
| GSE13712_SHEAR | Down | -0.2297137543 |
| GSE13712_STATIC | Down | -0.1341419194 |
| GSE19018 | Down | -0.3531060300 |
| GSE19899_A1 | Down | -0.1467821182 |
| GSE19899_A2 | Down | -1.2318215912 |
| PubMed_21979375_A1 | Up | 0.0722955010 |
| PubMed_21979375_A2 | Down | -0.3108333506 |
| GSE35957 | Down | -0.4393252215 |
| GSE36640 | Down | -0.2466848462 |
| GSE54402 | Down | -0.4351217395 |
| GSE9593 | Down | -0.0131168374 |
| GSE43922 | Down | -0.5706724484 |
| GSE24585 | Up | 0.1149011190 |
| GSE37065 | Down | -0.0005977467 |
| GSE28863_A1 | Up | 0.4810808431 |
| GSE28863_A2 | Down | -0.0443513266 |
| GSE28863_A3 | Down | -0.7541196853 |
| GSE28863_A4 | Down | -0.0390966477 |
| GSE48662 | Down | -0.0318781708 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
