HCSGD entry for PTRH1
1. General information
| Official gene symbol | PTRH1 |
|---|---|
| Entrez ID | 138428 |
| Gene full name | peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) |
| Other gene symbols | C9orf115 PTH1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004045 | Aminoacyl-tRNA hydrolase activity | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7771053455 | 0.5632901030 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0308750029 |
| GSE13712_SHEAR | Up | 0.0797279861 |
| GSE13712_STATIC | Up | 0.0826488321 |
| GSE19018 | Up | 0.1296796446 |
| GSE19899_A1 | Down | -0.1346444564 |
| GSE19899_A2 | Up | 0.1920754508 |
| PubMed_21979375_A1 | Down | -0.0195837758 |
| PubMed_21979375_A2 | Down | -0.1400473833 |
| GSE35957 | Down | -0.2422175800 |
| GSE36640 | Up | 0.3603218615 |
| GSE54402 | Up | 0.0705576281 |
| GSE9593 | Up | 0.0323412825 |
| GSE43922 | Up | 0.0465992753 |
| GSE24585 | Down | -0.1613967531 |
| GSE37065 | Down | -0.2007347121 |
| GSE28863_A1 | Down | -0.1803108697 |
| GSE28863_A2 | Down | -0.1143493029 |
| GSE28863_A3 | Up | 0.0858273582 |
| GSE28863_A4 | Up | 0.0936917128 |
| GSE48662 | Up | 0.0744611660 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005177 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031393 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
