HCSGD entry for CPT2
1. General information
| Official gene symbol | CPT2 |
|---|---|
| Entrez ID | 1376 |
| Gene full name | carnitine palmitoyltransferase 2 |
| Other gene symbols | CPT1 CPTASE IIAE4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004095 | Carnitine O-palmitoyltransferase activity | NAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | NAS TAS | cellular_component |
| GO:0006635 | Fatty acid beta-oxidation | IEA | biological_process |
| GO:0006853 | Carnitine shuttle | TAS | biological_process |
| GO:0044255 | Cellular lipid metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3456592987 | 0.4702570267 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2708120286 |
| GSE13712_SHEAR | Down | -0.0106730739 |
| GSE13712_STATIC | Up | 0.0904360761 |
| GSE19018 | Down | -0.0549029277 |
| GSE19899_A1 | Up | 0.1383271771 |
| GSE19899_A2 | Up | 0.4902708225 |
| PubMed_21979375_A1 | Down | -0.4865591122 |
| PubMed_21979375_A2 | Up | 0.1351556176 |
| GSE35957 | Down | -0.0894742991 |
| GSE36640 | Up | 0.0426238585 |
| GSE54402 | Up | 0.2242971457 |
| GSE9593 | Down | -0.4208628039 |
| GSE43922 | Up | 0.1254494060 |
| GSE24585 | Up | 0.4835212603 |
| GSE37065 | Down | -0.0742220460 |
| GSE28863_A1 | Up | 0.0099612043 |
| GSE28863_A2 | Up | 0.0976951708 |
| GSE28863_A3 | Down | -0.6282120078 |
| GSE28863_A4 | Down | -0.3096910341 |
| GSE48662 | Down | -0.0437718644 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025385 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043910 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
