HCSGD entry for VPS37A
1. General information
| Official gene symbol | VPS37A |
|---|---|
| Entrez ID | 137492 |
| Gene full name | vacuolar protein sorting 37 homolog A (S. cerevisiae) |
| Other gene symbols | HCRP1 PQBP2 SPG53 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000813 | ESCRT I complex | IDA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0010008 | Endosome membrane | TAS | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016197 | Endosomal transport | TAS | biological_process |
| GO:0019068 | Virion assembly | TAS | biological_process |
| GO:0019082 | Viral protein processing | TAS | biological_process |
| GO:0031902 | Late endosome membrane | IEA | cellular_component |
| GO:0043162 | Ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | IMP | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2907547054 | 0.8023101212 | 0.9898300828 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1544934547 |
| GSE13712_SHEAR | Up | 0.2703003844 |
| GSE13712_STATIC | Up | 0.1734839389 |
| GSE19018 | Down | -0.0945038545 |
| GSE19899_A1 | Up | 0.0149979484 |
| GSE19899_A2 | Up | 0.0180673505 |
| PubMed_21979375_A1 | Up | 0.1246538161 |
| PubMed_21979375_A2 | Up | 0.1510722529 |
| GSE35957 | Up | 0.2710306541 |
| GSE36640 | Up | 0.6705350897 |
| GSE54402 | Up | 0.0171424866 |
| GSE9593 | Up | 0.5522421214 |
| GSE43922 | Down | -0.0043828564 |
| GSE24585 | Up | 0.1287044171 |
| GSE37065 | Up | 0.0299527358 |
| GSE28863_A1 | Down | -0.1059841322 |
| GSE28863_A2 | Up | 0.2067326037 |
| GSE28863_A3 | Down | -0.4632003408 |
| GSE28863_A4 | Down | -0.2926930808 |
| GSE48662 | Up | 0.0325811771 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019385 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050734 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
