HCSGD entry for SPATA18
1. General information
| Official gene symbol | SPATA18 |
|---|---|
| Entrez ID | 132671 |
| Gene full name | spermatogenesis associated 18 |
| Other gene symbols | Mieap SPETEX1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005741 | Mitochondrial outer membrane | IDA IEA | cellular_component |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0033554 | Cellular response to stress | IEA | biological_process |
| GO:0035694 | Mitochondrial protein catabolic process | IMP | biological_process |
| GO:0035695 | Mitochondrion degradation by induced vacuole formation | IMP | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0003040804 | 0.9740918848 | 0.0467970930 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6357410865 |
| GSE13712_SHEAR | Up | 0.4485797747 |
| GSE13712_STATIC | Up | 0.5214335716 |
| GSE19018 | Up | 0.8782481828 |
| GSE19899_A1 | Up | 0.3458100999 |
| GSE19899_A2 | Up | 1.7317818562 |
| PubMed_21979375_A1 | Up | 0.4339105257 |
| PubMed_21979375_A2 | Up | 1.5344864292 |
| GSE35957 | Up | 0.5907255897 |
| GSE36640 | Up | 2.5739320501 |
| GSE54402 | Down | -0.9302093037 |
| GSE9593 | Up | 0.7879651246 |
| GSE43922 | Up | 1.0214385171 |
| GSE24585 | Up | 1.0713919007 |
| GSE37065 | Up | 0.4124950452 |
| GSE28863_A1 | Up | 0.2007931702 |
| GSE28863_A2 | Down | -0.2641641041 |
| GSE28863_A3 | Down | -0.6609320404 |
| GSE28863_A4 | Up | 0.0667486489 |
| GSE48662 | Up | 0.8161327444 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017774 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
