HCSGD entry for LSMEM2
1. General information
| Official gene symbol | LSMEM2 |
|---|---|
| Entrez ID | 132228 |
| Gene full name | leucine-rich single-pass membrane protein 2 |
| Other gene symbols | C3orf45 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8276634816 | 0.5552874891 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0545029868 |
| GSE13712_SHEAR | Up | 0.1236220890 |
| GSE13712_STATIC | Down | -0.1011244959 |
| GSE19018 | Up | 0.1254523368 |
| GSE19899_A1 | Down | -0.1342368635 |
| GSE19899_A2 | Up | 0.0942181986 |
| PubMed_21979375_A1 | Up | 0.0649076021 |
| PubMed_21979375_A2 | Down | -0.0582826810 |
| GSE35957 | Up | 0.0833646347 |
| GSE36640 | Up | 0.0936666661 |
| GSE54402 | Up | 0.0116088713 |
| GSE9593 | Up | 0.0217295107 |
| GSE43922 | Up | 0.0393347518 |
| GSE24585 | Down | -0.0993853625 |
| GSE37065 | Up | 0.0283290199 |
| GSE28863_A1 | Down | -0.2246916226 |
| GSE28863_A2 | Down | -0.0327465297 |
| GSE28863_A3 | Up | 0.1372428855 |
| GSE28863_A4 | Down | -0.1218538400 |
| GSE48662 | Up | 0.0023203878 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018597 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022956 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
