HCSGD entry for BBS5
1. General information
| Official gene symbol | BBS5 |
|---|---|
| Entrez ID | 129880 |
| Gene full name | Bardet-Biedl syndrome 5 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001103 | RNA polymerase II repressing transcription factor binding | IPI | molecular_function |
| GO:0001947 | Heart looping | ISS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007601 | Visual perception | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0032266 | Phosphatidylinositol-3-phosphate binding | IDA | molecular_function |
| GO:0032402 | Melanosome transport | ISS | biological_process |
| GO:0034464 | BBSome | IDA | cellular_component |
| GO:0036064 | Ciliary basal body | ISS | cellular_component |
| GO:0042384 | Cilium assembly | IMP | biological_process |
| GO:0044458 | Motile cilium assembly | ISS | biological_process |
| GO:0050896 | Response to stimulus | IEA | biological_process |
| GO:0060170 | Ciliary membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2127568557 | 0.3428456328 | 0.8890892698 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1201433526 |
| GSE13712_SHEAR | Down | -0.0237238051 |
| GSE13712_STATIC | Up | 0.2470251773 |
| GSE19018 | Down | -0.2442299450 |
| GSE19899_A1 | Up | 0.0919569834 |
| GSE19899_A2 | Up | 0.3558618020 |
| PubMed_21979375_A1 | Down | -0.2783174788 |
| PubMed_21979375_A2 | Up | 0.4971994787 |
| GSE35957 | Up | 0.4556241305 |
| GSE36640 | Up | 0.4231970444 |
| GSE54402 | Up | 0.0975715840 |
| GSE9593 | Down | -0.1047951929 |
| GSE43922 | Down | -0.0945953656 |
| GSE24585 | Up | 0.0484447312 |
| GSE37065 | Down | -0.0644435619 |
| GSE28863_A1 | Down | -0.1931279649 |
| GSE28863_A2 | Down | -0.1919164333 |
| GSE28863_A3 | Down | -0.4804849882 |
| GSE28863_A4 | Up | 0.1345064671 |
| GSE48662 | Up | 0.1124867190 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
