HCSGD entry for COL9A1
1. General information
| Official gene symbol | COL9A1 |
|---|---|
| Entrez ID | 1297 |
| Gene full name | collagen, type IX, alpha 1 |
| Other gene symbols | DJ149L1.1.2 EDM6 MED STL4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001894 | Tissue homeostasis | IEA | biological_process |
| GO:0003417 | Growth plate cartilage development | IEA | biological_process |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005594 | Collagen type IX | IDA TAS | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0009887 | Organ morphogenesis | TAS | biological_process |
| GO:0022617 | Extracellular matrix disassembly | TAS | biological_process |
| GO:0030020 | Extracellular matrix structural constituent conferring tensile strength | IC | molecular_function |
| GO:0030198 | Extracellular matrix organization | TAS | biological_process |
| GO:0030574 | Collagen catabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8583108089 | 0.7602341286 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1361835639 |
| GSE13712_SHEAR | Up | 0.0897337114 |
| GSE13712_STATIC | Up | 0.0147700466 |
| GSE19018 | Up | 0.0981610808 |
| GSE19899_A1 | Up | 0.0018500444 |
| GSE19899_A2 | Down | -0.0328180549 |
| PubMed_21979375_A1 | Up | 0.0252677877 |
| PubMed_21979375_A2 | Up | 0.0604205335 |
| GSE35957 | Up | 0.0774829281 |
| GSE36640 | Down | -0.0085045804 |
| GSE54402 | Down | -0.0233377246 |
| GSE9593 | Up | 0.0072510581 |
| GSE43922 | Up | 0.0190508793 |
| GSE24585 | Up | 0.0581644000 |
| GSE37065 | Down | -0.0229248247 |
| GSE28863_A1 | Down | -0.1887278870 |
| GSE28863_A2 | Down | -0.1611482792 |
| GSE28863_A3 | Up | 0.1707993305 |
| GSE28863_A4 | Up | 0.1162985343 |
| GSE48662 | Up | 0.0612819831 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
