HCSGD entry for TBC1D20
1. General information
| Official gene symbol | TBC1D20 |
|---|---|
| Entrez ID | 128637 |
| Gene full name | TBC1 domain family, member 20 |
| Other gene symbols | C20orf140 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005097 | Rab GTPase activator activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0089775123 | 0.9905349379 | 0.2422090164 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0145839026 |
| GSE13712_SHEAR | Down | -0.0532536688 |
| GSE13712_STATIC | Up | 0.0790365416 |
| GSE19018 | Up | 0.0158647732 |
| GSE19899_A1 | Up | 0.3625122737 |
| GSE19899_A2 | Up | 0.5913422269 |
| PubMed_21979375_A1 | Up | 0.4908057877 |
| PubMed_21979375_A2 | Up | 1.3703022831 |
| GSE35957 | Up | 0.2841185789 |
| GSE36640 | Up | 0.3379115313 |
| GSE54402 | Up | 0.2292632344 |
| GSE9593 | Up | 0.5224911572 |
| GSE43922 | Down | -0.0088506279 |
| GSE24585 | Up | 0.5507364442 |
| GSE37065 | Down | -0.1335215160 |
| GSE28863_A1 | Up | 0.7496187702 |
| GSE28863_A2 | Up | 0.6331246260 |
| GSE28863_A3 | Up | 0.2370782555 |
| GSE28863_A4 | Down | -0.0268427607 |
| GSE48662 | Up | 0.4437076453 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT028089 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038344 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052174 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
