HCSGD entry for TYW3
1. General information
| Official gene symbol | TYW3 |
|---|---|
| Entrez ID | 127253 |
| Gene full name | tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) |
| Other gene symbols | C1orf171 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1277154439 | 0.4777097641 | 0.7272681789 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3596956660 |
| GSE13712_SHEAR | Down | -0.2270752709 |
| GSE13712_STATIC | Down | -0.0879710808 |
| GSE19018 | Up | 0.0135286079 |
| GSE19899_A1 | Down | -0.1189192953 |
| GSE19899_A2 | Up | 0.1527035461 |
| PubMed_21979375_A1 | Up | 1.0848530315 |
| PubMed_21979375_A2 | Up | 0.8798830149 |
| GSE35957 | Down | -0.2679075684 |
| GSE36640 | Down | -1.2148011580 |
| GSE54402 | Up | 0.4030124522 |
| GSE9593 | Down | -0.3994461193 |
| GSE43922 | Up | 0.0804970950 |
| GSE24585 | Down | -0.1225910916 |
| GSE37065 | Up | 0.0247698357 |
| GSE28863_A1 | Up | 0.2564853184 |
| GSE28863_A2 | Up | 0.5167262281 |
| GSE28863_A3 | Down | -0.3736370174 |
| GSE28863_A4 | Up | 0.0419771183 |
| GSE48662 | Down | -0.0754860698 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016492 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030497 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-328-3p | MIMAT0000752 | MIRT043795 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
