HCSGD entry for GABPB2
1. General information
| Official gene symbol | GABPB2 |
|---|---|
| Entrez ID | 126626 |
| Gene full name | GA binding protein transcription factor, beta subunit 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0044212 | Transcription regulatory region DNA binding | IDA | molecular_function |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9106355610 | 0.0078760381 | 0.9999902473 | 0.1775434075 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2663038962 |
| GSE13712_SHEAR | Up | 0.2861726247 |
| GSE13712_STATIC | Down | -0.1656979141 |
| GSE19018 | Down | -0.5222532385 |
| GSE19899_A1 | Down | -0.1734038213 |
| GSE19899_A2 | Down | -1.7566476460 |
| PubMed_21979375_A1 | Down | -0.8821284211 |
| PubMed_21979375_A2 | Down | -0.3960170398 |
| GSE35957 | Up | 0.1860684773 |
| GSE36640 | Down | -0.5138098828 |
| GSE54402 | Down | -0.2383464274 |
| GSE9593 | Up | 0.3228217415 |
| GSE43922 | Down | -0.2043371475 |
| GSE24585 | Up | 0.1356462401 |
| GSE37065 | Up | 0.1021966697 |
| GSE28863_A1 | Down | -0.2710017303 |
| GSE28863_A2 | Down | -1.0923696024 |
| GSE28863_A3 | Down | -0.1182423766 |
| GSE28863_A4 | Down | -0.1018125562 |
| GSE48662 | Down | -0.1112053566 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026307 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-425-3p | MIMAT0001343 | MIRT042429 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052267 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
