HCSGD entry for ZSWIM7
1. General information
| Official gene symbol | ZSWIM7 |
|---|---|
| Entrez ID | 125150 |
| Gene full name | zinc finger, SWIM-type containing 7 |
| Other gene symbols | SWS1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000724 | Double-strand break repair via homologous recombination | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0050821 | Protein stabilization | IMP | biological_process |
| GO:0097196 | Shu complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9868742753 | 0.0153927700 | 0.9999902473 | 0.2437635873 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4139810069 |
| GSE13712_SHEAR | Down | -0.5761646629 |
| GSE13712_STATIC | Down | -0.3045321005 |
| GSE19018 | Down | -0.4790674498 |
| GSE19899_A1 | Down | -0.2540976103 |
| GSE19899_A2 | Down | -0.3302738305 |
| PubMed_21979375_A1 | Down | -0.8739472991 |
| PubMed_21979375_A2 | Down | -0.3868200635 |
| GSE35957 | Down | -0.4933187295 |
| GSE36640 | Down | -0.5348973906 |
| GSE54402 | Down | -0.1197967595 |
| GSE9593 | Down | -0.2278070473 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1214806495 |
| GSE28863_A2 | Down | -0.7423411772 |
| GSE28863_A3 | Up | 0.1232885365 |
| GSE28863_A4 | Up | 0.0092608036 |
| GSE48662 | Up | 0.1020824128 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025326 | Proteomics | Functional MTI (Weak) | 21566225 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
