HCSGD entry for LSM12
1. General information
| Official gene symbol | LSM12 |
|---|---|
| Entrez ID | 124801 |
| Gene full name | LSM12 homolog (S. cerevisiae) |
| Other gene symbols | PNAS-135 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
Not in the Gene Ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2482758140 | 0.5885905209 | 0.9363971629 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0494325328 |
| GSE13712_SHEAR | Up | 0.1961818449 |
| GSE13712_STATIC | Up | 0.1656453465 |
| GSE19018 | Up | 0.0163722420 |
| GSE19899_A1 | Up | 0.0477132972 |
| GSE19899_A2 | Up | 0.3895277451 |
| PubMed_21979375_A1 | Up | 0.9050271071 |
| PubMed_21979375_A2 | Down | -0.1998563393 |
| GSE35957 | Down | -0.5846262851 |
| GSE36640 | Down | -0.3975389685 |
| GSE54402 | Up | 0.5841747736 |
| GSE9593 | Down | -0.0632486999 |
| GSE43922 | Up | 0.0840440586 |
| GSE24585 | Down | -0.1186376538 |
| GSE37065 | Down | -0.0501540158 |
| GSE28863_A1 | Down | -0.1371560722 |
| GSE28863_A2 | Down | -0.1293030876 |
| GSE28863_A3 | Up | 0.1433780632 |
| GSE28863_A4 | Up | 0.1965280100 |
| GSE48662 | Down | -0.1265018610 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019788 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028449 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030438 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039994 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042258 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044673 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
