HCSGD entry for USH1G
1. General information
| Official gene symbol | USH1G |
|---|---|
| Entrez ID | 124590 |
| Gene full name | Usher syndrome 1G (autosomal recessive) |
| Other gene symbols | ANKS4A SANS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007605 | Sensory perception of sound | IMP | biological_process |
| GO:0015629 | Actin cytoskeleton | ISS | cellular_component |
| GO:0042472 | Inner ear morphogenesis | IEA | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0045494 | Photoreceptor cell maintenance | IMP | biological_process |
| GO:0050953 | Sensory perception of light stimulus | IMP | biological_process |
| GO:0050957 | Equilibrioception | IMP | biological_process |
| GO:0060113 | Inner ear receptor cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2863814103 | 0.9179766460 | 0.9857257879 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0180414074 |
| GSE13712_SHEAR | Down | -0.2504850006 |
| GSE13712_STATIC | Up | 0.1589574791 |
| GSE19018 | Up | 0.3233278583 |
| GSE19899_A1 | Down | -0.0885754657 |
| GSE19899_A2 | Up | 0.0204958244 |
| PubMed_21979375_A1 | Up | 0.2234081483 |
| PubMed_21979375_A2 | Up | 0.2456861439 |
| GSE35957 | Down | -0.0090579328 |
| GSE36640 | Up | 0.0132847134 |
| GSE54402 | Down | -0.0150674697 |
| GSE9593 | Up | 0.1096521674 |
| GSE43922 | Up | 0.1170247356 |
| GSE24585 | Up | 0.1231470874 |
| GSE37065 | Down | -0.1168477532 |
| GSE28863_A1 | Up | 0.0040701450 |
| GSE28863_A2 | Up | 0.0685143463 |
| GSE28863_A3 | Up | 0.5763041481 |
| GSE28863_A4 | Up | 0.0467559183 |
| GSE48662 | Up | 0.0112050454 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
