HCSGD entry for SNX20
1. General information
| Official gene symbol | SNX20 |
|---|---|
| Entrez ID | 124460 |
| Gene full name | sorting nexin 20 |
| Other gene symbols | SLIC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7435953649 | 0.7398558337 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0614627820 |
| GSE13712_SHEAR | Up | 0.0202364212 |
| GSE13712_STATIC | Down | -0.0872066503 |
| GSE19018 | Down | -0.0576038742 |
| GSE19899_A1 | Up | 0.1044765567 |
| GSE19899_A2 | Up | 0.0560639483 |
| PubMed_21979375_A1 | Down | -0.1861755427 |
| PubMed_21979375_A2 | Down | -0.1785482897 |
| GSE35957 | Up | 0.1211017636 |
| GSE36640 | Down | -0.0587199887 |
| GSE54402 | Up | 0.0128635823 |
| GSE9593 | Down | -0.0486411570 |
| GSE43922 | Up | 0.2365628220 |
| GSE24585 | Down | -0.1557957731 |
| GSE37065 | Down | -0.1179701518 |
| GSE28863_A1 | Up | 0.0550237022 |
| GSE28863_A2 | Up | 0.0126066479 |
| GSE28863_A3 | Up | 0.2352716282 |
| GSE28863_A4 | Up | 0.1953788200 |
| GSE48662 | Down | -0.0151649945 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
