HCSGD entry for FOPNL
1. General information
| Official gene symbol | FOPNL |
|---|---|
| Entrez ID | 123811 |
| Gene full name | FGFR1OP N-terminal like |
| Other gene symbols | C16orf63 FOR20 PHSECRG2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005815 | Microtubule organizing center | IEA | cellular_component |
| GO:0031514 | Motile cilium | IEA ISS | cellular_component |
| GO:0034451 | Centriolar satellite | IDA | cellular_component |
| GO:0034453 | Microtubule anchoring | IEA | biological_process |
| GO:0036064 | Ciliary basal body | ISS | cellular_component |
| GO:0042384 | Cilium assembly | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8062601079 | 0.0848991072 | 0.9999902473 | 0.5529906258 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2914546760 |
| GSE13712_SHEAR | Down | -0.0458233931 |
| GSE13712_STATIC | Up | 0.0634609745 |
| GSE19018 | Up | 0.0261091467 |
| GSE19899_A1 | Down | -0.1033852742 |
| GSE19899_A2 | Down | -0.4091906055 |
| PubMed_21979375_A1 | Down | -0.0506370375 |
| PubMed_21979375_A2 | Down | -1.2671541159 |
| GSE35957 | Down | -0.0785546576 |
| GSE36640 | Down | -0.6474917532 |
| GSE54402 | Up | 0.0989641108 |
| GSE9593 | Down | -0.0400930520 |
| GSE43922 | Down | -0.0579187314 |
| GSE24585 | Down | -0.2363419735 |
| GSE37065 | Down | -0.0476776122 |
| GSE28863_A1 | Up | 0.1004763245 |
| GSE28863_A2 | Up | 0.0551492440 |
| GSE28863_A3 | Down | -0.7305899245 |
| GSE28863_A4 | Up | 0.3186366184 |
| GSE48662 | Down | -0.1029792682 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-32-5p | MIMAT0000090 | MIRT028340 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036007 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045452 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050954 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
