HCSGD entry for TRAPPC6B

1. General information

Official gene symbolTRAPPC6B
Entrez ID122553
Gene full nametrafficking protein particle complex 6B
Other gene symbolsTPC6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005783Endoplasmic reticulumIEAcellular_component
GO:0005794Golgi apparatusIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01964173850.96373102850.34124765681.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.4495863968
GSE13712_SHEARUp0.6150003982
GSE13712_STATICUp0.2807335116
GSE19018Down-0.3162480174
GSE19899_A1Up0.6079710532
GSE19899_A2Up0.1071545577
PubMed_21979375_A1Up0.5171258833
PubMed_21979375_A2Up0.3614700026
GSE35957Up0.1785099457
GSE36640Up0.3435138115
GSE54402Up0.0564719577
GSE9593Up0.2147151971
GSE43922Up0.3083700896
GSE24585Up0.8504454072
GSE37065Up0.1039896426
GSE28863_A1Down-0.2759943434
GSE28863_A2Down-0.0886826047
GSE28863_A3Down-0.3395389554
GSE28863_A4Up0.1718567345
GSE48662Up0.4718179276

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

S-PALMITOYL-L-CYSTEINEDB08342 -

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.