HCSGD entry for RPL39L
1. General information
| Official gene symbol | RPL39L |
|---|---|
| Entrez ID | 116832 |
| Gene full name | ribosomal protein L39-like |
| Other gene symbols | RPL39L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003735 | Structural constituent of ribosome | IEA | molecular_function |
| GO:0006412 | Translation | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEP | biological_process |
| GO:0022625 | Cytosolic large ribosomal subunit | NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9953736674 | 0.0001971620 | 0.9999902473 | 0.0248226415 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6189497063 |
| GSE13712_SHEAR | Down | -0.2383427251 |
| GSE13712_STATIC | Down | -0.5036183496 |
| GSE19018 | Down | -0.1110900421 |
| GSE19899_A1 | Down | -0.8530982316 |
| GSE19899_A2 | Down | -3.5116025632 |
| PubMed_21979375_A1 | Down | -3.2682347886 |
| PubMed_21979375_A2 | Down | -4.5045733946 |
| GSE35957 | Down | -1.8283964876 |
| GSE36640 | Down | -3.3765732279 |
| GSE54402 | Down | -0.4430611408 |
| GSE9593 | Down | -1.0781578634 |
| GSE43922 | Down | -0.2274212841 |
| GSE24585 | Up | 0.1548960124 |
| GSE37065 | Down | -0.0204237957 |
| GSE28863_A1 | Down | -0.1205520493 |
| GSE28863_A2 | Up | 0.2060095647 |
| GSE28863_A3 | Down | -0.6078526543 |
| GSE28863_A4 | Up | 0.1394701460 |
| GSE48662 | Down | -0.8140344307 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-100-5p | MIMAT0000098 | MIRT048437 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
