HCSGD entry for GINM1
1. General information
| Official gene symbol | GINM1 |
|---|---|
| Entrez ID | 116254 |
| Gene full name | glycoprotein integral membrane 1 |
| Other gene symbols | C6orf72 dJ12G14.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1031097299 | 0.2193060294 | 0.6679673148 | 0.9012262295 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2795597433 |
| GSE13712_SHEAR | Up | 0.0782383110 |
| GSE13712_STATIC | Up | 0.2010268003 |
| GSE19018 | Up | 0.6059277863 |
| GSE19899_A1 | Down | -0.7175081443 |
| GSE19899_A2 | Down | -0.0002122724 |
| PubMed_21979375_A1 | Down | -0.7529813435 |
| PubMed_21979375_A2 | Down | -0.3086002967 |
| GSE35957 | Up | 0.2352764302 |
| GSE36640 | Up | 0.8873331712 |
| GSE54402 | Down | -0.5423976073 |
| GSE9593 | Up | 0.7371374021 |
| GSE43922 | Down | -0.2888116613 |
| GSE24585 | Up | 0.1817587869 |
| GSE37065 | Up | 0.3400035019 |
| GSE28863_A1 | Down | -0.0034086755 |
| GSE28863_A2 | Up | 0.4231882484 |
| GSE28863_A3 | Down | -0.6012053311 |
| GSE28863_A4 | Down | -0.4025547116 |
| GSE48662 | Up | 0.4121470865 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002645 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002645 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024465 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026141 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
