HCSGD entry for TRMT61A
1. General information
| Official gene symbol | TRMT61A |
|---|---|
| Entrez ID | 115708 |
| Gene full name | tRNA methyltransferase 61 homolog A (S. cerevisiae) |
| Other gene symbols | C14orf172 GCD14 Gcd14p TRM61 hTRM61 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0016429 | TRNA (adenine-N1-)-methyltransferase activity | IEA | molecular_function |
| GO:0031515 | TRNA (m1A) methyltransferase complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2674230576 | 0.9323208199 | 0.9639608737 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1524209466 |
| GSE13712_SHEAR | Down | -0.0115107738 |
| GSE13712_STATIC | Up | 0.0950274278 |
| GSE19018 | Down | -0.0103314577 |
| GSE19899_A1 | Up | 0.0335159702 |
| GSE19899_A2 | Up | 0.5045351056 |
| PubMed_21979375_A1 | Up | 0.7210944347 |
| PubMed_21979375_A2 | Up | 0.4120964792 |
| GSE35957 | Down | -0.1484682105 |
| GSE36640 | Up | 0.0792641353 |
| GSE54402 | Up | 0.0406440421 |
| GSE9593 | Up | 0.0130574958 |
| GSE43922 | Up | 0.0551868973 |
| GSE24585 | Down | -0.2203080617 |
| GSE37065 | Down | -0.0486801471 |
| GSE28863_A1 | Down | -0.0269714773 |
| GSE28863_A2 | Down | -0.1582860382 |
| GSE28863_A3 | Up | 0.1175523370 |
| GSE28863_A4 | Up | 0.0779287742 |
| GSE48662 | Up | 0.3733390712 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-5p | MIMAT0003886 | MIRT039179 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-342-3p | MIMAT0000753 | MIRT043665 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049081 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
