HCSGD entry for MALSU1
1. General information
| Official gene symbol | MALSU1 |
|---|---|
| Entrez ID | 115416 |
| Gene full name | mitochondrial assembly of ribosomal large subunit 1 |
| Other gene symbols | C7orf30 mtRsfA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005759 | Mitochondrial matrix | IEA | cellular_component |
| GO:0042273 | Ribosomal large subunit biogenesis | IMP | biological_process |
| GO:0070130 | Negative regulation of mitochondrial translation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7958829110 | 0.2781331256 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3120651991 |
| GSE13712_SHEAR | Up | 0.0191419006 |
| GSE13712_STATIC | Down | -0.1758682338 |
| GSE19018 | Down | -0.0776682517 |
| GSE19899_A1 | Up | 0.0474712752 |
| GSE19899_A2 | Down | -0.1061308229 |
| PubMed_21979375_A1 | Down | -0.9212241667 |
| PubMed_21979375_A2 | Down | -0.0394371902 |
| GSE35957 | Down | -0.2886869933 |
| GSE36640 | Up | 0.1847387762 |
| GSE54402 | Up | 0.3887834144 |
| GSE9593 | Down | -0.1666691997 |
| GSE43922 | Down | -0.0622658022 |
| GSE24585 | Down | -0.0948992290 |
| GSE37065 | Up | 0.0442349803 |
| GSE28863_A1 | Down | -0.2483420142 |
| GSE28863_A2 | Down | -0.0093848959 |
| GSE28863_A3 | Up | 0.2758829500 |
| GSE28863_A4 | Down | -0.2445330784 |
| GSE48662 | Down | -0.0104028943 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022482 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030390 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031558 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
