HCSGD entry for MBD6
1. General information
| Official gene symbol | MBD6 |
|---|---|
| Entrez ID | 114785 |
| Gene full name | methyl-CpG binding domain protein 6 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IDA IEA | molecular_function |
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0997543634 | 0.9327050188 | 0.6588426493 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1262911386 |
| GSE13712_SHEAR | Up | 0.1476511812 |
| GSE13712_STATIC | Down | -0.1677614897 |
| GSE19018 | Up | 0.2033257310 |
| GSE19899_A1 | Up | 0.2259399712 |
| GSE19899_A2 | Up | 0.6450581976 |
| PubMed_21979375_A1 | Down | -0.2009835410 |
| PubMed_21979375_A2 | Up | 0.6867644788 |
| GSE35957 | Down | -0.1474866653 |
| GSE36640 | Down | -0.0310996880 |
| GSE54402 | Down | -0.0210681798 |
| GSE9593 | Down | -0.0327937294 |
| GSE43922 | Up | 0.2798814273 |
| GSE24585 | Up | 0.2654476165 |
| GSE37065 | Down | -0.1722190602 |
| GSE28863_A1 | Down | -0.1803202985 |
| GSE28863_A2 | Down | -0.0961027857 |
| GSE28863_A3 | Up | 0.3169529888 |
| GSE28863_A4 | Up | 0.1922240576 |
| GSE48662 | Up | 0.3811404292 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022555 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030471 | qRT-PCR;Microarray | Functional MTI (Weak) | 19748357 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052082 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
