HCSGD entry for CASC4
1. General information
| Official gene symbol | CASC4 |
|---|---|
| Entrez ID | 113201 |
| Gene full name | cancer susceptibility candidate 4 |
| Other gene symbols | H63 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1977423920 | 0.9564761331 | 0.8596326342 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0847264279 |
| GSE13712_SHEAR | Up | 0.0377656963 |
| GSE13712_STATIC | Up | 0.1151774035 |
| GSE19018 | Up | 0.1546165801 |
| GSE19899_A1 | Up | 0.0986368911 |
| GSE19899_A2 | Up | 0.2658662286 |
| PubMed_21979375_A1 | Down | -0.4801995637 |
| PubMed_21979375_A2 | Up | 0.1864858819 |
| GSE35957 | Up | 0.1959122112 |
| GSE36640 | Up | 0.3630537168 |
| GSE54402 | Up | 0.0797839757 |
| GSE9593 | Up | 0.1960393244 |
| GSE43922 | Down | -0.0390646856 |
| GSE24585 | Up | 0.1599894256 |
| GSE37065 | Up | 0.1625303152 |
| GSE28863_A1 | Up | 0.1827707158 |
| GSE28863_A2 | Up | 0.3173762187 |
| GSE28863_A3 | Down | -0.2662601278 |
| GSE28863_A4 | Up | 0.1570853197 |
| GSE48662 | Down | -0.1303076214 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-151a-3p | MIMAT0000757 | MIRT019515 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT045774 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047881 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
