HCSGD entry for NACC1
1. General information
| Official gene symbol | NACC1 |
|---|---|
| Entrez ID | 112939 |
| Gene full name | nucleus accumbens associated 1, BEN and BTB (POZ) domain containing |
| Other gene symbols | BEND8 BTBD14B BTBD30 NAC-1 NAC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008284 | Positive regulation of cell proliferation | IMP | biological_process |
| GO:0016604 | Nuclear body | IDA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IMP | biological_process |
| GO:0051260 | Protein homooligomerization | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4944805365 | 0.3755963641 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0800739235 |
| GSE13712_SHEAR | Up | 0.2545234033 |
| GSE13712_STATIC | Up | 0.0870735973 |
| GSE19018 | Up | 0.1201659605 |
| GSE19899_A1 | Up | 0.1111938188 |
| GSE19899_A2 | Up | 0.5312231055 |
| PubMed_21979375_A1 | Up | 0.1118536322 |
| PubMed_21979375_A2 | Up | 0.1783741792 |
| GSE35957 | Down | -0.0950701864 |
| GSE36640 | Down | -0.1154578556 |
| GSE54402 | Up | 0.1849930550 |
| GSE9593 | Down | -0.1469122599 |
| GSE43922 | Up | 0.3416460438 |
| GSE24585 | Down | -0.4750459848 |
| GSE37065 | Down | -0.0124849509 |
| GSE28863_A1 | Down | -0.1612808872 |
| GSE28863_A2 | Down | -0.1343989478 |
| GSE28863_A3 | Down | -0.6202629895 |
| GSE28863_A4 | Down | -0.0433587841 |
| GSE48662 | Down | -0.1162376871 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-218-5p | MIMAT0000275 | MIRT004542 | qRT-PCR//Microarray | Functional MTI (Weak) | 19168627 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040358 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-185-5p | MIMAT0000455 | MIRT045313 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
