HCSGD entry for STX1B

1. General information

Official gene symbolSTX1B
Entrez ID112755
Gene full namesyntaxin 1B
Other gene symbolsSTX1B1 STX1B2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005230Extracellular ligand-gated ion channel activityTASmolecular_function
GO:0005234Extracellular-glutamate-gated ion channel activityTASmolecular_function
GO:0005484SNAP receptor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005815Microtubule organizing centerIEAcellular_component
GO:0005819SpindleIEAcellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006810TransportTASbiological_process
GO:0006836Neurotransmitter transportIEAbiological_process
GO:0006886Intracellular protein transportIEAbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0016020MembraneIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0017157Regulation of exocytosisIEAbiological_process
GO:0019904Protein domain specific bindingIEAmolecular_function
GO:0034220Ion transmembrane transportTASbiological_process
GO:0055085Transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.66848853390.67560555830.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1506565146
GSE13712_SHEARUp0.1614452611
GSE13712_STATICUp0.3130320738
GSE19018Up0.2581859820
GSE19899_A1Down-0.1229457662
GSE19899_A2Down-0.1380321872
PubMed_21979375_A1Down-0.3623947127
PubMed_21979375_A2Up0.0640191843
GSE35957Up0.0974123485
GSE36640Up0.1122186184
GSE54402Down-0.1227770884
GSE9593Down-0.0520965987
GSE43922Down-0.0730580483
GSE24585Down-0.0097454667
GSE37065Down-0.0484063235
GSE28863_A1Up0.0530766536
GSE28863_A2Up0.1019610810
GSE28863_A3Up0.3299180545
GSE28863_A4Up0.0089734770
GSE48662Up0.0012936308

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-330-5pMIMAT0004693MIRT038244CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.