HCSGD entry for SEC23IP
1. General information
| Official gene symbol | SEC23IP |
|---|---|
| Entrez ID | 11196 |
| Gene full name | SEC23 interacting protein |
| Other gene symbols | P125 P125A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | TAS | biological_process |
| GO:0007030 | Golgi organization | TAS | biological_process |
| GO:0012507 | ER to Golgi transport vesicle membrane | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7266833023 | 0.2651410927 | 0.9999902473 | 0.9867933362 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0761932086 |
| GSE13712_SHEAR | Down | -0.0047136112 |
| GSE13712_STATIC | Up | 0.1033244825 |
| GSE19018 | Down | -0.5484844606 |
| GSE19899_A1 | Down | -0.0523753405 |
| GSE19899_A2 | Up | 0.1161409214 |
| PubMed_21979375_A1 | Up | 0.1139994093 |
| PubMed_21979375_A2 | Up | 0.3106949524 |
| GSE35957 | Down | -0.0588436454 |
| GSE36640 | Down | -0.3962191792 |
| GSE54402 | Up | 0.2164221049 |
| GSE9593 | Up | 0.0043768946 |
| GSE43922 | Up | 0.1339047194 |
| GSE24585 | Down | -0.1473600281 |
| GSE37065 | Down | -0.0545387977 |
| GSE28863_A1 | Up | 0.2419342422 |
| GSE28863_A2 | Up | 0.1989697177 |
| GSE28863_A3 | Down | -0.3772936704 |
| GSE28863_A4 | Down | -0.0126376814 |
| GSE48662 | Down | -0.6954659530 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001336 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021371 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043062 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045496 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048762 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051660 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
