HCSGD entry for KRR1
1. General information
| Official gene symbol | KRR1 |
|---|---|
| Entrez ID | 11103 |
| Gene full name | KRR1, small subunit (SSU) processome component, homolog (yeast) |
| Other gene symbols | HRB2 RIP-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006364 | RRNA processing | IEA | biological_process |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2737981232 | 0.7736812279 | 0.9702713190 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3777123096 |
| GSE13712_SHEAR | Up | 0.1686235740 |
| GSE13712_STATIC | Down | -0.1170548320 |
| GSE19018 | Down | -0.1648090737 |
| GSE19899_A1 | Up | 0.3135278194 |
| GSE19899_A2 | Down | -0.1819416958 |
| PubMed_21979375_A1 | Up | 0.1203111666 |
| PubMed_21979375_A2 | Up | 0.2141370633 |
| GSE35957 | Up | 0.1324730877 |
| GSE36640 | Down | -0.1619637707 |
| GSE54402 | Up | 0.1119530084 |
| GSE9593 | Down | -0.0052737956 |
| GSE43922 | Up | 0.1639515622 |
| GSE24585 | Down | -0.0185099489 |
| GSE37065 | Up | 0.3303183873 |
| GSE28863_A1 | Up | 0.1128290044 |
| GSE28863_A2 | Down | -0.3253818093 |
| GSE28863_A3 | Down | -0.2388295298 |
| GSE28863_A4 | Up | 0.0929019326 |
| GSE48662 | Down | -0.2029518165 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
