HCSGD entry for DNAJB4
1. General information
| Official gene symbol | DNAJB4 |
|---|---|
| Entrez ID | 11080 |
| Gene full name | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| Other gene symbols | DNAJW DjB4 HLJ1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006457 | Protein folding | IEA | biological_process |
| GO:0006986 | Response to unfolded protein | TAS | biological_process |
| GO:0009408 | Response to heat | TAS | biological_process |
| GO:0051082 | Unfolded protein binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0890401542 | 0.0020255461 | 0.6254672805 | 0.0859176000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5664475955 |
| GSE13712_SHEAR | Down | -0.4401576297 |
| GSE13712_STATIC | Down | -0.6397326098 |
| GSE19018 | Up | 0.7030102343 |
| GSE19899_A1 | Down | -1.0378930269 |
| GSE19899_A2 | Down | -0.9517115178 |
| PubMed_21979375_A1 | Down | -1.4462120599 |
| PubMed_21979375_A2 | Down | -2.0069649687 |
| GSE35957 | Up | 1.0904238315 |
| GSE36640 | Up | 1.3429971372 |
| GSE54402 | Down | -0.9455148056 |
| GSE9593 | Up | 1.3604853918 |
| GSE43922 | Down | -1.3199456057 |
| GSE24585 | Up | 0.7162358515 |
| GSE37065 | Down | -0.0828807677 |
| GSE28863_A1 | Down | -1.1344385366 |
| GSE28863_A2 | Up | 0.3534953717 |
| GSE28863_A3 | Down | -0.7184230202 |
| GSE28863_A4 | Down | -0.4389561623 |
| GSE48662 | Down | -0.5509522967 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001471 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT001471 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019300 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021629 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024618 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-148a-3p | MIMAT0000243 | MIRT026002 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026165 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027036 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028464 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028881 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
