HCSGD entry for SNRNP35
1. General information
| Official gene symbol | SNRNP35 |
|---|---|
| Entrez ID | 11066 |
| Gene full name | small nuclear ribonucleoprotein 35kDa (U11/U12) |
| Other gene symbols | HM-1 U1SNRNPBP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005689 | U12-type spliceosomal complex | IDA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008380 | RNA splicing | IC | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5566107709 | 0.3311836746 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0280868444 |
| GSE13712_SHEAR | Down | -0.0067788096 |
| GSE13712_STATIC | Down | -0.0560182936 |
| GSE19018 | Down | -0.3747294033 |
| GSE19899_A1 | Up | 0.0998663832 |
| GSE19899_A2 | Up | 0.2460523706 |
| PubMed_21979375_A1 | Up | 0.6363710433 |
| PubMed_21979375_A2 | Down | -0.3445216550 |
| GSE35957 | Down | -0.0174876929 |
| GSE36640 | Down | -0.0790617808 |
| GSE54402 | Up | 0.1780729173 |
| GSE9593 | Down | -0.4392613193 |
| GSE43922 | Up | 0.0281515383 |
| GSE24585 | Down | -0.0012775138 |
| GSE37065 | Up | 0.0430346258 |
| GSE28863_A1 | Down | -0.0767062595 |
| GSE28863_A2 | Down | -0.1932129261 |
| GSE28863_A3 | Up | 0.2392253960 |
| GSE28863_A4 | Up | 0.1016897866 |
| GSE48662 | Down | -0.0998057609 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023770 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045159 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
