HCSGD entry for B3GNT1
1. General information
| Official gene symbol | B3GNT1 |
|---|---|
| Entrez ID | 11041 |
| Gene full name | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 |
| Other gene symbols | B3GN-T1 B3GNT6 BETA3GNTI iGAT iGNT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0007411 | Axon guidance | IEA | biological_process |
| GO:0008532 | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity | IDA | molecular_function |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0030173 | Integral component of Golgi membrane | NAS | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030311 | Poly-N-acetyllactosamine biosynthetic process | IDA | biological_process |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5048876904 | 0.1424032180 | 0.9999902473 | 0.7263943992 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1854022851 |
| GSE13712_SHEAR | Down | -0.7575232221 |
| GSE13712_STATIC | Down | -0.1997304313 |
| GSE19018 | Up | 0.6491425066 |
| GSE19899_A1 | Down | -0.1088163937 |
| GSE19899_A2 | Down | -0.1863030211 |
| PubMed_21979375_A1 | Down | -0.8988342688 |
| PubMed_21979375_A2 | Down | -0.3959021802 |
| GSE35957 | Down | -0.0954597541 |
| GSE36640 | Up | 0.3289536463 |
| GSE54402 | Down | -0.3841208849 |
| GSE9593 | Up | 0.1215366102 |
| GSE43922 | Down | -0.0803241033 |
| GSE24585 | Down | -0.2159396018 |
| GSE37065 | Up | 0.2710002745 |
| GSE28863_A1 | Up | 0.4300523058 |
| GSE28863_A2 | Up | 0.2242673858 |
| GSE28863_A3 | Down | -0.1308228051 |
| GSE28863_A4 | Up | 0.0954517954 |
| GSE48662 | Up | 0.4639138520 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
