HCSGD entry for SLC35A1
1. General information
| Official gene symbol | SLC35A1 |
|---|---|
| Entrez ID | 10559 |
| Gene full name | solute carrier family 35 (CMP-sialic acid transporter), member A1 |
| Other gene symbols | CDG2F CMPST CST hCST |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA TAS | cellular_component |
| GO:0005338 | Nucleotide-sugar transmembrane transporter activity | IEA | molecular_function |
| GO:0005351 | Sugar:hydrogen symporter activity | IEA | molecular_function |
| GO:0005456 | CMP-N-acetylneuraminate transmembrane transporter activity | TAS | molecular_function |
| GO:0005794 | Golgi apparatus | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006464 | Cellular protein modification process | TAS | biological_process |
| GO:0015780 | Nucleotide-sugar transport | IEA | biological_process |
| GO:0015782 | CMP-N-acetylneuraminate transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:0090481 | Pyrimidine nucleotide-sugar transmembrane transport | TAS | biological_process |
| GO:1901679 | Nucleotide transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3947746818 | 0.6133944075 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0514061802 |
| GSE13712_SHEAR | Up | 0.0452383973 |
| GSE13712_STATIC | Down | -0.0288545136 |
| GSE19018 | Up | 0.2633785387 |
| GSE19899_A1 | Up | 0.1955978581 |
| GSE19899_A2 | Up | 0.2157342281 |
| PubMed_21979375_A1 | Down | -0.4603595157 |
| PubMed_21979375_A2 | Up | 0.1522598336 |
| GSE35957 | Up | 0.0152925896 |
| GSE36640 | Up | 0.8610672320 |
| GSE54402 | Down | -0.6230144290 |
| GSE9593 | Down | -0.1110802529 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0450878127 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT000905 | Microarray | Functional MTI (Weak) | 18362358 |
| hsa-miR-15a-5p | MIMAT0000068 | MIRT000906 | Microarray | Functional MTI (Weak) | 18362358 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | NA | hsa-miR-15a | 18362358 | |||
| hsa-miR-16-5p | MIMAT0000069 | NA | hsa-miR-16 | 18362358 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
