HCSGD entry for UBD

1. General information

Official gene symbolUBD
Entrez ID10537
Gene full nameubiquitin D
Other gene symbolsFAT10 GABBR1 UBD-3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005737CytoplasmISScellular_component
GO:0006508ProteolysisNASbiological_process
GO:0006511Ubiquitin-dependent protein catabolic processIDAbiological_process
GO:0010243Response to organonitrogen compoundIEAbiological_process
GO:0016235AggresomeIDAcellular_component
GO:0016567Protein ubiquitinationIDAbiological_process
GO:0032446Protein modification by small protein conjugationNASbiological_process
GO:0034341Response to interferon-gammaIEPbiological_process
GO:0034612Response to tumor necrosis factorIEPbiological_process
GO:0043011Myeloid dendritic cell differentiationIMPbiological_process
GO:0043065Positive regulation of apoptotic processIMPbiological_process
GO:0043123Positive regulation of I-kappaB kinase/NF-kappaB signalingIMPbiological_process
GO:0070628Proteasome bindingIDAmolecular_function
GO:0070842Aggresome assemblyIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.95588307440.78092467610.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0340347000

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017438MicroarrayFunctional MTI (Weak)18185580
hsa-miR-24-3pMIMAT0000080MIRT030468qRT-PCR;MicroarrayFunctional MTI (Weak)19748357
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.