HCSGD entry for CIB2
1. General information
| Official gene symbol | CIB2 |
|---|---|
| Entrez ID | 10518 |
| Gene full name | calcium and integrin binding family member 2 |
| Other gene symbols | DFNB48 KIP2 USH1J |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001917 | Photoreceptor inner segment | IEA ISS | cellular_component |
| GO:0005178 | Integrin binding | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005927 | Muscle tendon junction | IEA | cellular_component |
| GO:0007229 | Integrin-mediated signaling pathway | IEA | biological_process |
| GO:0031594 | Neuromuscular junction | IEA | cellular_component |
| GO:0042383 | Sarcolemma | IEA | cellular_component |
| GO:0045494 | Photoreceptor cell maintenance | IEA ISS | biological_process |
| GO:0055074 | Calcium ion homeostasis | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9771434710 | 0.0502002432 | 0.9999902473 | 0.4198667302 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1141924926 |
| GSE13712_SHEAR | Down | -0.3652327303 |
| GSE13712_STATIC | Down | -0.4502375202 |
| GSE19018 | Down | -0.0114725541 |
| GSE19899_A1 | Down | -0.1003056993 |
| GSE19899_A2 | Down | -0.0808392215 |
| PubMed_21979375_A1 | Down | -0.0563423935 |
| PubMed_21979375_A2 | Down | -0.2628117486 |
| GSE35957 | Down | -0.1430255551 |
| GSE36640 | Up | 0.3189366555 |
| GSE54402 | Down | -0.2328434202 |
| GSE9593 | Up | 0.0745929975 |
| GSE43922 | Down | -0.0441378886 |
| GSE24585 | Up | 0.4542016289 |
| GSE37065 | Down | -0.3241451504 |
| GSE28863_A1 | Down | -0.2376412443 |
| GSE28863_A2 | Down | -0.4881726298 |
| GSE28863_A3 | Down | -0.1421620670 |
| GSE28863_A4 | Down | -0.2379919752 |
| GSE48662 | Down | -0.0427353960 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024873 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026843 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
