HCSGD entry for SEMA4B
1. General information
| Official gene symbol | SEMA4B |
|---|---|
| Entrez ID | 10509 |
| Gene full name | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B |
| Other gene symbols | SEMAC SemC |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0364835797 | 0.7603064739 | 0.4332829125 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1413187761 |
| GSE13712_SHEAR | Up | 0.0677588700 |
| GSE13712_STATIC | Up | 0.6623823542 |
| GSE19018 | Up | 0.1314630677 |
| GSE19899_A1 | Up | 0.2304317405 |
| GSE19899_A2 | Up | 0.3401553188 |
| PubMed_21979375_A1 | Up | 0.4558881469 |
| PubMed_21979375_A2 | Up | 0.8550339424 |
| GSE35957 | Down | -1.2957602734 |
| GSE36640 | Down | -1.9194756096 |
| GSE54402 | Up | 0.5430679123 |
| GSE9593 | Down | -0.1299063762 |
| GSE43922 | Up | 0.4299354725 |
| GSE24585 | Up | 0.2529037608 |
| GSE37065 | Up | 0.3089008867 |
| GSE28863_A1 | Down | -0.0131212571 |
| GSE28863_A2 | Up | 0.4235676546 |
| GSE28863_A3 | Up | 0.0660255593 |
| GSE28863_A4 | Up | 0.1472138910 |
| GSE48662 | Down | -0.0785524336 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017490 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051498 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
