HCSGD entry for SEMA6B
1. General information
| Official gene symbol | SEMA6B |
|---|---|
| Entrez ID | 10501 |
| Gene full name | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B |
| Other gene symbols | SEM-SEMA-Y SEMA-VIB SEMAN semaZ |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0030215 | Semaphorin receptor binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2880770791 | 0.8650985867 | 0.9867843091 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0810643695 |
| GSE13712_SHEAR | Up | 0.6589534128 |
| GSE13712_STATIC | Up | 0.3529007601 |
| GSE19018 | Up | 0.0857333336 |
| GSE19899_A1 | Down | -0.0279100730 |
| GSE19899_A2 | Up | 0.2110496763 |
| PubMed_21979375_A1 | Down | -0.0751149738 |
| PubMed_21979375_A2 | Down | -0.1619396660 |
| GSE35957 | Up | 0.1815121584 |
| GSE36640 | Up | 0.1118739182 |
| GSE54402 | Up | 0.0392123213 |
| GSE9593 | Down | -0.0420328962 |
| GSE43922 | Up | 0.0692105224 |
| GSE24585 | Up | 0.1708167854 |
| GSE37065 | Down | -0.1026593196 |
| GSE28863_A1 | Down | -0.0553966305 |
| GSE28863_A2 | Down | -0.1804587595 |
| GSE28863_A3 | Up | 0.3523188777 |
| GSE28863_A4 | Up | 0.0499315553 |
| GSE48662 | Up | 0.1517628072 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031258 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
