HCSGD entry for SEMA6C
1. General information
| Official gene symbol | SEMA6C |
|---|---|
| Entrez ID | 10500 |
| Gene full name | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C |
| Other gene symbols | SEMAY m-SemaY m-SemaY2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007411 | Axon guidance | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030215 | Semaphorin receptor binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3152004141 | 0.6127823259 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2082514466 |
| GSE13712_SHEAR | Down | -0.7100759059 |
| GSE13712_STATIC | Down | -0.4740591966 |
| GSE19018 | Up | 0.1454282998 |
| GSE19899_A1 | Down | -0.0663604900 |
| GSE19899_A2 | Up | 0.2237326361 |
| PubMed_21979375_A1 | Up | 0.1019701146 |
| PubMed_21979375_A2 | Down | -0.0350304502 |
| GSE35957 | Up | 0.0758826187 |
| GSE36640 | Down | -0.1591512766 |
| GSE54402 | Down | -0.1607244311 |
| GSE9593 | Up | 0.3381166570 |
| GSE43922 | Up | 0.0543101858 |
| GSE24585 | Up | 0.3594831621 |
| GSE37065 | Down | -0.0457406860 |
| GSE28863_A1 | Up | 0.0261402181 |
| GSE28863_A2 | Up | 0.3256445258 |
| GSE28863_A3 | Up | 0.3685696591 |
| GSE28863_A4 | Down | -0.0719599735 |
| GSE48662 | Up | 0.4049450150 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
