HCSGD entry for CLGN
1. General information
| Official gene symbol | CLGN |
|---|---|
| Entrez ID | 1047 |
| Gene full name | calmegin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA TAS | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006457 | Protein folding | IEA | biological_process |
| GO:0006461 | Protein complex assembly | IEA | biological_process |
| GO:0007338 | Single fertilization | TAS | biological_process |
| GO:0007339 | Binding of sperm to zona pellucida | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0051082 | Unfolded protein binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0002462558 | 0.4055093879 | 0.0444836601 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.4683383506 |
| GSE13712_SHEAR | Down | -0.8557821648 |
| GSE13712_STATIC | Down | -0.8354970567 |
| GSE19018 | Down | -0.3865473974 |
| GSE19899_A1 | Up | 2.1545599542 |
| GSE19899_A2 | Up | 3.4514871884 |
| PubMed_21979375_A1 | Up | 2.7829489520 |
| PubMed_21979375_A2 | Up | 1.8200688239 |
| GSE35957 | Up | 1.1047754523 |
| GSE36640 | Up | 1.0346809844 |
| GSE54402 | Up | 0.4865265125 |
| GSE9593 | Up | 0.4090446082 |
| GSE43922 | Up | 1.8110207831 |
| GSE24585 | Up | 0.5704083140 |
| GSE37065 | Up | 1.2792513606 |
| GSE28863_A1 | Down | -0.0578544808 |
| GSE28863_A2 | Up | 0.2337516317 |
| GSE28863_A3 | Up | 0.0910978961 |
| GSE28863_A4 | Down | -0.4084948444 |
| GSE48662 | Down | -0.9616863515 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
