HCSGD entry for COG5
1. General information
| Official gene symbol | COG5 |
|---|---|
| Entrez ID | 10466 |
| Gene full name | component of oligomeric golgi complex 5 |
| Other gene symbols | CDG2I GOLTC1 GTC90 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0006891 | Intra-Golgi vesicle-mediated transport | IEA NAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0017119 | Golgi transport complex | IDA IEA NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1474290301 | 0.4137238593 | 0.7694283789 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1743589658 |
| GSE13712_SHEAR | Down | -0.2210542896 |
| GSE13712_STATIC | Down | -0.0003977191 |
| GSE19018 | Up | 1.1575579619 |
| GSE19899_A1 | Down | -0.2180871065 |
| GSE19899_A2 | Down | -0.0573466317 |
| PubMed_21979375_A1 | Up | 0.3692548827 |
| PubMed_21979375_A2 | Up | 0.1816862592 |
| GSE35957 | Down | -0.0289246181 |
| GSE36640 | Up | 0.7209517972 |
| GSE54402 | Down | -0.1826674750 |
| GSE9593 | Up | 0.5153485118 |
| GSE43922 | Down | -0.0040526924 |
| GSE24585 | Up | 0.1718227657 |
| GSE37065 | Down | -0.1373821762 |
| GSE28863_A1 | Down | -0.0028856920 |
| GSE28863_A2 | Up | 0.4780012294 |
| GSE28863_A3 | Down | -0.8390436268 |
| GSE28863_A4 | Down | -0.2192306037 |
| GSE48662 | Down | -0.1696671383 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027656 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-320a | MIMAT0000510 | MIRT044640 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
