HCSGD entry for CDX1

1. General information

Official gene symbolCDX1
Entrez ID1044
Gene full namecaudal type homeobox 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000980RNA polymerase II distal enhancer sequence-specific DNA bindingIDAmolecular_function
GO:0001205RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcriptionIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006366Transcription from RNA polymerase II promoterIDAbiological_process
GO:0009887Organ morphogenesisTASbiological_process
GO:0009952Anterior/posterior pattern specificationIEAbiological_process
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIDAbiological_process
GO:0060349Bone morphogenesisIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.59124051140.75279085900.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2308632680
GSE13712_SHEARDown-0.1280759249
GSE13712_STATICUp0.0440194354
GSE19018Down-0.1148892798
GSE19899_A1Down-0.0638623263
GSE19899_A2Up0.3521353217
PubMed_21979375_A1Up0.0430288635
PubMed_21979375_A2Down-0.0990857141
GSE35957Up0.3456730653
GSE36640Down-0.1019509439
GSE54402Up0.0718158876
GSE9593Up0.0005032731
GSE43922Up0.0554396680
GSE24585Down-0.0573059520
GSE37065Down-0.0683035464
GSE28863_A1Up0.1410596131
GSE28863_A2Up0.1247939435
GSE28863_A3Up0.1206594951
GSE28863_A4Up0.0186569314
GSE48662Up0.2794369249

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.