HCSGD entry for ST3GAL6
1. General information
| Official gene symbol | ST3GAL6 |
|---|---|
| Entrez ID | 10402 |
| Gene full name | ST3 beta-galactoside alpha-2,3-sialyltransferase 6 |
| Other gene symbols | SIAT10 ST3GALVI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006464 | Cellular protein modification process | IDA | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006664 | Glycolipid metabolic process | IDA | biological_process |
| GO:0008373 | Sialyltransferase activity | IEA | molecular_function |
| GO:0009311 | Oligosaccharide metabolic process | IDA | biological_process |
| GO:0016021 | Integral component of membrane | IEA NAS | cellular_component |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0030173 | Integral component of Golgi membrane | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0052798 | Beta-galactoside alpha-2,3-sialyltransferase activity | IDA | molecular_function |
| GO:0071354 | Cellular response to interleukin-6 | IEP | biological_process |
| GO:0097503 | Sialylation | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1893521561 | 0.1958681015 | 0.8470215353 | 0.8573830534 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0175812795 |
| GSE13712_SHEAR | Down | -0.8039122527 |
| GSE13712_STATIC | Down | -0.5758886506 |
| GSE19018 | Down | -0.3503963528 |
| GSE19899_A1 | Up | 0.0617191918 |
| GSE19899_A2 | Up | 0.4333659698 |
| PubMed_21979375_A1 | Down | -0.3934766442 |
| PubMed_21979375_A2 | Up | 1.2175082176 |
| GSE35957 | Up | 0.6791983895 |
| GSE36640 | Down | -0.0518091317 |
| GSE54402 | Up | 0.4725925745 |
| GSE9593 | Up | 0.3147887131 |
| GSE43922 | Up | 0.1067698973 |
| GSE24585 | Down | -0.2560164730 |
| GSE37065 | Up | 0.1004522503 |
| GSE28863_A1 | Down | -0.1330729795 |
| GSE28863_A2 | Up | 0.3730079999 |
| GSE28863_A3 | Down | -0.0311559325 |
| GSE28863_A4 | Down | -0.1597736604 |
| GSE48662 | Down | -0.1956784316 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024498 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026490 | Microarray | Functional MTI (Weak) | 19074876 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
