HCSGD entry for CDO1
1. General information
| Official gene symbol | CDO1 |
|---|---|
| Entrez ID | 1036 |
| Gene full name | cysteine dioxygenase, type I |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000096 | Sulfur amino acid metabolic process | TAS | biological_process |
| GO:0000097 | Sulfur amino acid biosynthetic process | TAS | biological_process |
| GO:0000098 | Sulfur amino acid catabolic process | TAS | biological_process |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006534 | Cysteine metabolic process | TAS | biological_process |
| GO:0006954 | Inflammatory response | TAS | biological_process |
| GO:0007595 | Lactation | IEA | biological_process |
| GO:0008198 | Ferrous iron binding | IEA | molecular_function |
| GO:0017172 | Cysteine dioxygenase activity | ISS TAS | molecular_function |
| GO:0019448 | L-cysteine catabolic process | IEA | biological_process |
| GO:0033762 | Response to glucagon | IEA | biological_process |
| GO:0034641 | Cellular nitrogen compound metabolic process | TAS | biological_process |
| GO:0042412 | Taurine biosynthetic process | IEA TAS | biological_process |
| GO:0043200 | Response to amino acid | IEA | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0045471 | Response to ethanol | IEA | biological_process |
| GO:0051384 | Response to glucocorticoid | IEA | biological_process |
| GO:0051591 | Response to cAMP | IEA | biological_process |
| GO:0055114 | Oxidation-reduction process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7963118764 | 0.0324411762 | 0.9999902473 | 0.3392468017 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2779100956 |
| GSE13712_SHEAR | Down | -0.6983101119 |
| GSE13712_STATIC | Down | -0.0081633268 |
| GSE19018 | Down | -0.3643099211 |
| GSE19899_A1 | Down | -0.0845459836 |
| GSE19899_A2 | Down | -0.3572861412 |
| PubMed_21979375_A1 | Up | 0.3246934125 |
| PubMed_21979375_A2 | Down | -0.6884705466 |
| GSE35957 | Down | -0.6670751214 |
| GSE36640 | Down | -0.4872514331 |
| GSE54402 | Down | -0.0170231739 |
| GSE9593 | Down | -0.2393029727 |
| GSE43922 | Down | -0.4359456285 |
| GSE24585 | Up | 0.5951432662 |
| GSE37065 | Up | 0.3880330046 |
| GSE28863_A1 | Down | -0.3832527444 |
| GSE28863_A2 | Down | -0.0682152514 |
| GSE28863_A3 | Down | -0.0033264703 |
| GSE28863_A4 | Down | -0.0003964698 |
| GSE48662 | Up | 0.0672321826 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| L-Cysteine | DB00151 | NUTR00018 | DB04443 |
| NADH | DB00157 | NUTR00041 | DB01907 | EXPT02287 | DB03527 |
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022885 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
