HCSGD entry for B3GNT3
1. General information
| Official gene symbol | B3GNT3 |
|---|---|
| Entrez ID | 10331 |
| Gene full name | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 |
| Other gene symbols | B3GAL-T8 B3GN-T3 B3GNT-3 HP10328 TMEM3 beta3Gn-T3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0008378 | Galactosyltransferase activity | IEA | molecular_function |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0047223 | Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4878986133 | 0.7023745222 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0806551910 |
| GSE13712_SHEAR | Down | -0.4595098580 |
| GSE13712_STATIC | Down | -0.0422095504 |
| GSE19018 | Up | 0.2623607329 |
| GSE19899_A1 | Up | 0.0243948902 |
| GSE19899_A2 | Down | -0.0733508345 |
| PubMed_21979375_A1 | Up | 0.2048564560 |
| PubMed_21979375_A2 | Down | -0.2372811420 |
| GSE35957 | Up | 0.3458781634 |
| GSE36640 | Down | -0.0126071766 |
| GSE54402 | Up | 0.0651635024 |
| GSE9593 | Down | -0.0051566136 |
| GSE43922 | Up | 0.0508478567 |
| GSE24585 | Up | 0.0299684281 |
| GSE37065 | Down | -0.0152225574 |
| GSE28863_A1 | Down | -0.0893366456 |
| GSE28863_A2 | Down | -0.0389215868 |
| GSE28863_A3 | Up | 0.4732185598 |
| GSE28863_A4 | Up | 0.0630349245 |
| GSE48662 | Down | -0.0298355808 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018502 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
