HCSGD entry for BCAS2
1. General information
| Official gene symbol | BCAS2 |
|---|---|
| Entrez ID | 10286 |
| Gene full name | breast carcinoma amplified sequence 2 |
| Other gene symbols | DAM1 SPF27 Snt309 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000375 | RNA splicing, via transesterification reactions | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005681 | Spliceosomal complex | IDA | cellular_component |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008380 | RNA splicing | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1160711789 | 0.9323135671 | 0.6995992901 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4798031924 |
| GSE13712_SHEAR | Up | 0.0764749402 |
| GSE13712_STATIC | Up | 0.2297340121 |
| GSE19018 | Up | 0.0506031911 |
| GSE19899_A1 | Up | 0.4515939458 |
| GSE19899_A2 | Down | -0.0125659884 |
| PubMed_21979375_A1 | Up | 0.6874706589 |
| PubMed_21979375_A2 | Up | 0.3114884035 |
| GSE35957 | Down | -0.2458649810 |
| GSE36640 | Down | -0.3045387500 |
| GSE54402 | Up | 0.3024718987 |
| GSE9593 | Down | -0.3251114632 |
| GSE43922 | Up | 0.2325196336 |
| GSE24585 | Up | 0.2344962035 |
| GSE37065 | Up | 0.0130946017 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1960741693 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031526 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
