HCSGD entry for CDH18
1. General information
| Official gene symbol | CDH18 |
|---|---|
| Entrez ID | 1016 |
| Gene full name | cadherin 18, type 2 |
| Other gene symbols | CDH14 CDH14L CDH24 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA TAS | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0034332 | Adherens junction organization | TAS | biological_process |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9044789940 | 0.1010082634 | 0.9999902473 | 0.6085233463 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0601609278 |
| GSE13712_SHEAR | Down | -0.1433054081 |
| GSE13712_STATIC | Down | -0.0655192913 |
| GSE19018 | Down | -0.0886645955 |
| GSE19899_A1 | Down | -0.0512311697 |
| GSE19899_A2 | Down | -0.1234247466 |
| PubMed_21979375_A1 | Down | -0.3512103399 |
| PubMed_21979375_A2 | Down | -0.0613497672 |
| GSE35957 | Up | 0.2171078809 |
| GSE36640 | Up | 0.0126424825 |
| GSE54402 | Down | -0.0271938453 |
| GSE9593 | Up | 0.1898695540 |
| GSE43922 | Down | -1.0285544558 |
| GSE24585 | Down | -0.0978187670 |
| GSE37065 | Up | 0.0193917870 |
| GSE28863_A1 | Down | -0.7713795138 |
| GSE28863_A2 | Up | 0.3415086369 |
| GSE28863_A3 | Down | -0.3357187070 |
| GSE28863_A4 | Up | 0.1766402708 |
| GSE48662 | Down | -0.1060674451 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7e-5p | MIMAT0000066 | MIRT051690 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
