HCSGD entry for PLXNC1
1. General information
| Official gene symbol | PLXNC1 |
|---|---|
| Entrez ID | 10154 |
| Gene full name | plexin C1 |
| Other gene symbols | CD232 PLXN-C1 VESPR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005102 | Receptor binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2574894077 | 0.5765521333 | 0.9512110456 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0910917247 |
| GSE13712_SHEAR | Down | -0.0791362892 |
| GSE13712_STATIC | Up | 0.2260096748 |
| GSE19018 | Down | -0.3445872978 |
| GSE19899_A1 | Down | -0.0501080105 |
| GSE19899_A2 | Down | -0.2479228515 |
| PubMed_21979375_A1 | Up | 0.1525174261 |
| PubMed_21979375_A2 | Down | -0.1295482377 |
| GSE35957 | Down | -0.0236201828 |
| GSE36640 | Down | -0.2567563364 |
| GSE54402 | Down | -0.2240397063 |
| GSE9593 | Up | 0.1319367838 |
| GSE43922 | Down | -0.0231456027 |
| GSE24585 | Up | 0.2078312941 |
| GSE37065 | Up | 0.4230788101 |
| GSE28863_A1 | Up | 0.4090671832 |
| GSE28863_A2 | Up | 0.7039424159 |
| GSE28863_A3 | Up | 0.5411560366 |
| GSE28863_A4 | Down | -0.0605501273 |
| GSE48662 | Up | 0.0131380199 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016344 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017321 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029051 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
