HCSGD entry for YAF2
1. General information
| Official gene symbol | YAF2 |
|---|---|
| Entrez ID | 10138 |
| Gene full name | YY1 associated factor 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003713 | Transcription coactivator activity | IDA | molecular_function |
| GO:0003714 | Transcription corepressor activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6925280460 | 0.3877114433 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0292658224 |
| GSE13712_SHEAR | Down | -0.2821614405 |
| GSE13712_STATIC | Down | -0.2270254654 |
| GSE19018 | Up | 0.0197403708 |
| GSE19899_A1 | Up | 0.0983736336 |
| GSE19899_A2 | Up | 0.1818618382 |
| PubMed_21979375_A1 | Up | 0.7535831359 |
| PubMed_21979375_A2 | Down | -0.0088281247 |
| GSE35957 | Up | 0.4491159317 |
| GSE36640 | Up | 0.0239034465 |
| GSE54402 | Up | 0.0344586890 |
| GSE9593 | Up | 0.0003683102 |
| GSE43922 | Up | 0.0545617545 |
| GSE24585 | Down | -0.1145755003 |
| GSE37065 | Down | -0.0391559736 |
| GSE28863_A1 | Down | -0.2627706662 |
| GSE28863_A2 | Down | -0.4412931413 |
| GSE28863_A3 | Down | -0.5056761139 |
| GSE28863_A4 | Up | 0.0348115184 |
| GSE48662 | Up | 0.2061342879 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027053 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
