HCSGD entry for CDH13

1. General information

Official gene symbolCDH13
Entrez ID1012
Gene full namecadherin 13, H-cadherin (heart)
Other gene symbolsCDHH P105
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000278Mitotic cell cycleIEAbiological_process
GO:0001558Regulation of cell growthIEAbiological_process
GO:0001938Positive regulation of endothelial cell proliferationIMPbiological_process
GO:0001954Positive regulation of cell-matrix adhesionIMPbiological_process
GO:0002040Sprouting angiogenesisIDAbiological_process
GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005615Extracellular spaceIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0005886Plasma membraneIDA IEA TAScellular_component
GO:0005901CaveolaIDAcellular_component
GO:0007156Homophilic cell adhesionIDA IEAbiological_process
GO:0007162Negative regulation of cell adhesionIDAbiological_process
GO:0007266Rho protein signal transductionIMPbiological_process
GO:0008285Negative regulation of cell proliferationIDAbiological_process
GO:0009897External side of plasma membraneIEAcellular_component
GO:0016339Calcium-dependent cell-cell adhesionIDAbiological_process
GO:0016601Rac protein signal transductionIMPbiological_process
GO:0030032Lamellipodium assemblyIDAbiological_process
GO:0030100Regulation of endocytosisIMPbiological_process
GO:0030169Low-density lipoprotein particle bindingIDAmolecular_function
GO:0030335Positive regulation of cell migrationIDAbiological_process
GO:0031225Anchored component of membraneIEAcellular_component
GO:0034329Cell junction assemblyTASbiological_process
GO:0034332Adherens junction organizationTASbiological_process
GO:0042058Regulation of epidermal growth factor receptor signaling pathwayIMPbiological_process
GO:0042803Protein homodimerization activityIEAmolecular_function
GO:0043005Neuron projectionIDAcellular_component
GO:0043542Endothelial cell migrationIDAbiological_process
GO:0043616Keratinocyte proliferationIDAbiological_process
GO:0045216Cell-cell junction organizationTASbiological_process
GO:0045296Cadherin bindingIDAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIMPbiological_process
GO:0048471Perinuclear region of cytoplasmIEAcellular_component
GO:0048661Positive regulation of smooth muscle cell proliferationIMPbiological_process
GO:0050850Positive regulation of calcium-mediated signalingIDAbiological_process
GO:0050927Positive regulation of positive chemotaxisIDAbiological_process
GO:0051668Localization within membraneIMPbiological_process
GO:0055096Low-density lipoprotein particle mediated signalingIDAbiological_process
GO:0055100Adiponectin bindingISSmolecular_function
GO:0071813Lipoprotein particle bindingIDAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.22370484780.01939588160.90402897930.2718418530

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-1.0881414052
GSE13712_SHEARDown-1.8547028828
GSE13712_STATICDown-2.6139585482
GSE19018Up1.4380417088
GSE19899_A1Up0.2619321840
GSE19899_A2Up0.3638171955
PubMed_21979375_A1Down-0.3848698131
PubMed_21979375_A2Down-0.6405843955
GSE35957Up0.2239501668
GSE36640Up0.2006057885
GSE54402Down-0.2199353842
GSE9593Down-0.0384245958
GSE43922Down-0.0575846145
GSE24585Up0.1125982858
GSE37065Down-0.2681035621
GSE28863_A1Down-0.2095390158
GSE28863_A2Up0.2083980132
GSE28863_A3Up0.1206910976
GSE28863_A4Up0.0779052290
GSE48662Up0.0622639498

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-155-5pMIMAT0000646MIRT021007ProteomicsFunctional MTI (Weak)18668040
hsa-miR-1MIMAT0000416MIRT024070ProteomicsFunctional MTI (Weak)18668040
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.