HCSGD entry for CTDSP2
1. General information
| Official gene symbol | CTDSP2 |
|---|---|
| Entrez ID | 10106 |
| Gene full name | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 |
| Other gene symbols | OS4 PSR2 SCP2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006470 | Protein dephosphorylation | IDA | biological_process |
| GO:0006987 | Activation of signaling protein activity involved in unfolded protein response | TAS | biological_process |
| GO:0008420 | CTD phosphatase activity | IDA | molecular_function |
| GO:0016791 | Phosphatase activity | IEA | molecular_function |
| GO:0030968 | Endoplasmic reticulum unfolded protein response | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7516323316 | 0.0368992022 | 0.9999902473 | 0.3621267338 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3110888159 |
| GSE13712_SHEAR | Down | -0.2917092659 |
| GSE13712_STATIC | Down | -0.5474901263 |
| GSE19018 | Up | 0.2399019544 |
| GSE19899_A1 | Down | -0.5997054034 |
| GSE19899_A2 | Down | -0.6310249835 |
| PubMed_21979375_A1 | Down | -0.5299198764 |
| PubMed_21979375_A2 | Down | -0.0216668058 |
| GSE35957 | Up | 0.2599304195 |
| GSE36640 | Down | -0.6733020785 |
| GSE54402 | Down | -0.0153956486 |
| GSE9593 | Down | -0.3078430615 |
| GSE43922 | Down | -0.5735960318 |
| GSE24585 | Up | 0.7045397750 |
| GSE37065 | Down | -0.1238739363 |
| GSE28863_A1 | Up | 0.8291248594 |
| GSE28863_A2 | Up | 0.1954805893 |
| GSE28863_A3 | Down | -0.4322778697 |
| GSE28863_A4 | Down | -0.0502838537 |
| GSE48662 | Down | -0.0925325026 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002613 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002613 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016407 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017775 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019804 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030513 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039866 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044322 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
